Modified - Identify metabolites using multiple databases

Function to identify metabolites using multiple databases at once. This function was modified from the package metid

Usage

mod_identify_all(
  ms1.data,
  ms2.data,
  db_dir,
  parameter.list,
  process_ms2 = FALSE
)

Arguments

ms1.data

A data.frame containing the columns 'FeatureID', 'mzmed' and 'rtmed'

ms2.data

An MSpectra object containing MS2 data

db_dir

Path where the databases are stored

parameter.list

A list containing the parameters to process each database. Parameters must be created using metid::metIdentifyParam()

Value

A list of mzIdentifyClass objects with the annotation results